ENSDARG00000056639


Danio rerio

Features
Gene ID: ENSDARG00000056639
  
Biological name :carmil2
  
Synonyms : capping protein regulator and myosin 1 linker 2 / carmil2
  
Possible biological names infered from orthology : Mus musculus capping protein regulator and myosin 1 linker 2 (Carmil2), mRNA. / Q3V3V9 / Q6F5E8
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 22302635
Gene end: 22396371
  
Corresponding Affymetrix probe sets: Dr.17913.1.S1_at (Zebrafish Array)   Dr.24143.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000123542
NCBI entrez gene - 567758     See in Manteia.
RefSeq - NM_001317766
RefSeq Peptide - NP_001304695
swissprot - F6NI44
ZFIN ID - ZDB-GENE-050419-197
Ensembl - ENSDARG00000056639
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CARMIL2ENSGALG00000021442Gallus gallus
 Q6F5E8ENSG00000159753Homo sapiens
 Q3V3V9ENSMUSG00000050357Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
carmil3 / capping protein regulator and myosin 1 linker 3 / Q3UFQ8* / Q8ND23* / Capping protein, Arp2/3 and myosin-I linker protein 3 *ENSDARG0000008699027
carmil1 / capping protein regulator and myosin 1 linker 1 / Q5VZK9* / Q6EDY6* / F-actin-uncapping protein LRRC16A *ENSDARG000001038873


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR029763  F-actin-uncapping protein RLTPR
 IPR031943  CARMIL, C-terminal domain
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0030011 maintenance of cell polarity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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