ENSDARG00000056665


Danio rerio

Features
Gene ID: ENSDARG00000056665
  
Biological name :nsun2
  
Synonyms : NOP2/Sun RNA methyltransferase family, member 2 / nsun2
  
Possible biological names infered from orthology : Q08J23 / Q1HFZ0 / tRNA (cytosine(34)-C(5))-methyltransferase
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 27858866
Gene end: 27902509
  
Corresponding Affymetrix probe sets: Dr.5306.1.S1_at (Zebrafish Array)   NM_199711_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000118997
Ensembl peptide - ENSDARP00000138423
NCBI entrez gene - 325292     See in Manteia.
RefSeq - NM_199711
RefSeq - XM_005170003
RefSeq Peptide - NP_956005
swissprot - A0A0R4IU00
swissprot - Q7ZTI1
swissprot - A5PMI3
ZFIN ID - ZDB-GENE-030131-4017
Ensembl - ENSDARG00000056665
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NSUN2ENSGALG00000013064Gallus gallus
 NSUN2ENSG00000037474Homo sapiens
 Nsun2ENSMUSG00000021595Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001678  SAM-dependent methyltransferase RsmB/NOP2-type
 IPR023267  RNA (C5-cytosine) methyltransferase
 IPR023270  tRNA (C5-cytosine) methyltransferase, NCL1
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000049 tRNA binding IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016428 tRNA (cytosine-5-)-methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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