ENSGALG00000013064


Gallus gallus

Features
Gene ID: ENSGALG00000013064
  
Biological name :NSUN2
  
Synonyms : NSUN2 / tRNA (cytosine(34)-C(5))-methyltransferase
  
Possible biological names infered from orthology : NOP2/Sun RNA methyltransferase family member 2 / Q08J23 / Q1HFZ0
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 80034291
Gene end: 80050765
  
Corresponding Affymetrix probe sets: GgaAffx.11733.1.S1_s_at (Chicken Array)   GgaAffx.8293.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021294
NCBI entrez gene - 420938     See in Manteia.
RefSeq - NM_001031004
RefSeq Peptide - NP_001026175
swissprot - F1NJM1
Ensembl - ENSGALG00000013064
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nsun2ENSDARG00000056665Danio rerio
 NSUN2ENSG00000037474Homo sapiens
 Nsun2ENSMUSG00000021595Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001678  SAM-dependent methyltransferase RsmB/NOP2-type
 IPR023267  RNA (C5-cytosine) methyltransferase
 IPR023270  tRNA (C5-cytosine) methyltransferase, NCL1
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0033313 meiotic cell cycle checkpoint IEA
 biological_processGO:0048820 hair follicle maturation IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0033391 chromatoid body IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016428 tRNA (cytosine-5-)-methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr