ENSDARG00000056704


Danio rerio

Features
Gene ID: ENSDARG00000056704
  
Biological name :zgc:91818
  
Synonyms : zgc:91818
  
Possible biological names infered from orthology : O60894 / Q9WTJ5 / RAMP1 / receptor activity modifying protein 1 / receptor (calcitonin) activity modifying protein 1
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 28778649
Gene end: 28867908
  
Corresponding Affymetrix probe sets: Dr.23270.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000060320
Ensembl peptide - ENSDARP00000145170
Ensembl peptide - ENSDARP00000150401
NCBI entrez gene - 436966     See in Manteia.
swissprot - Q6DGA3
ZFIN ID - ZDB-GENE-040718-446
Ensembl - ENSDARG00000056704
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAMP1ENSGALG00000003821Gallus gallus
 RAMP1ENSG00000132329Homo sapiens
 Ramp1ENSMUSG00000034353Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ramp2 / receptor (G protein-coupled) activity modifying protein 2 / O60895* / Q9WUP0* / receptor activity modifying protein 2*ENSDARG0000003789532
si:ch73-334d15.2ENSDARG0000008702023


Protein motifs (from Interpro)
Interpro ID Name
 IPR006985  Receptor activity modifying protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0008277 regulation of G-protein coupled receptor protein signaling pathway IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008565 protein transporter activity IEA


Pathways (from Reactome)
Pathway description
G alpha (s) signalling events
Calcitonin-like ligand receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000056590 calca / calcitonin/calcitonin-related polypeptide, alpha / CALCB* / P10092* / calcitonin related polypeptide beta*  / complex / reaction
 ENSDARG00000011571 calcrlb / calcitonin receptor-like b / CALCRL* / Q16602* / Q9R1W5* / calcitonin receptor like receptor* / Calcitonin-related peptide type 1 receptor *  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr