ENSDARG00000056830


Danio rerio

Features
Gene ID: ENSDARG00000056830
  
Biological name :si:ch211-107m4.1
  
Synonyms : si:ch211-107m4.1
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein U like 2 / Heteroous nuclear ribonucleoprotein U-like protein 2 / HNRNPUL2 / HNRNPUL2-BSCL2 / HNRNPUL2-BSCL2 readthrough (NMD candidate) / Q00PI9 / Q1KMD3
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 22481833
Gene end: 22495604
  
Corresponding Affymetrix probe sets: Dr.14457.1.A1_at (Zebrafish Array)   Dr.15093.1.A1_at (Zebrafish Array)   Dr.22017.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000119095
NCBI entrez gene - 569278     See in Manteia.
swissprot - E9QBM3
ZFIN ID - ZDB-GENE-081107-3
Ensembl - ENSDARG00000056830
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNRNPUL2-BSCL2ENSG00000234857Homo sapiens
 Q1KMD3ENSG00000214753Homo sapiens
 Q00PI9ENSMUSG00000071659Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hnrnpul1l / heterogeneous nuclear ribonucleoprotein U-like 1 like / Q9BUJ2* / HNRNPUL1* / heterogeneous nuclear ribonucleoprotein U like 1*ENSDARG0000007978034
hnrnpul1 / heterogeneous nuclear ribonucleoprotein U-like 1 / Q8VDM6* / Q9BUJ2* / Heteroous nuclear ribonucleoprotein U-like protein 1 *ENSDARG0000004056433
hnrnpub / heterogeneous nuclear ribonucleoprotein Ub / Q8VEK3* / HNRNPU* / Q00839* / Heteroous nuclear ribonucleoprotein U * / heterogeneous nuclear ribonucleoprotein U*ENSDARG0000000473532
hnrnpua / heterogeneous nuclear ribonucleoprotein Ua / Q8VEK3* / HNRNPU* / Q00839* / Heteroous nuclear ribonucleoprotein U * / heterogeneous nuclear ribonucleoprotein U*ENSDARG0000001520630


Protein motifs (from Interpro)
Interpro ID Name
 IPR003034  SAP domain
 IPR003877  SPRY domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr