ENSDARG00000040564


Danio rerio

Features
Gene ID: ENSDARG00000040564
  
Biological name :hnrnpul1
  
Synonyms : heterogeneous nuclear ribonucleoprotein U-like 1 / hnrnpul1
  
Possible biological names infered from orthology : Heteroous nuclear ribonucleoprotein U-like protein 1 / Q8VDM6 / Q9BUJ2
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 35807588
Gene end: 35837673
  
Corresponding Affymetrix probe sets: Dr.4194.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000059359
NCBI entrez gene - 406555     See in Manteia.
RefSeq - NM_213271
RefSeq Peptide - NP_998436
swissprot - Q1L9A1
ZFIN ID - ZDB-GENE-040426-2432
Ensembl - ENSDARG00000040564
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9BUJ2ENSG00000105323Homo sapiens
 Q8VDM6ENSMUSG00000040725Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hnrnpul1l / heterogeneous nuclear ribonucleoprotein U-like 1 like / Q9BUJ2* / HNRNPUL1* / heterogeneous nuclear ribonucleoprotein U like 1*ENSDARG0000007978058
hnrnpub / heterogeneous nuclear ribonucleoprotein Ub / Q8VEK3* / HNRNPU* / Q00839* / Heteroous nuclear ribonucleoprotein U * / heterogeneous nuclear ribonucleoprotein U*ENSDARG0000000473540
hnrnpua / heterogeneous nuclear ribonucleoprotein Ua / Q8VEK3* / HNRNPU* / Q00839* / Heteroous nuclear ribonucleoprotein U * / heterogeneous nuclear ribonucleoprotein U*ENSDARG0000001520637
si:ch211-107m4.1 / Q00PI9* / Q1KMD3* / HNRNPUL2* / HNRNPUL2-BSCL2* / HNRNPUL2-BSCL2 readthrough (NMD candidate)* / heterogeneous nuclear ribonucleoprotein U like 2* / Heteroous nuclear ribo...ENSDARG0000005683030


Protein motifs (from Interpro)
Interpro ID Name
 IPR001870  B30.2/SPRY domain
 IPR003034  SAP domain
 IPR003877  SPRY domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR027025  Heterogeneous nuclear ribonucleoprotein U-like protein 1
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0009615 response to virus IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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