ENSG00000105323


Homo sapiens

Features
Gene ID: ENSG00000105323
  
Biological name :HNRNPUL1
  
Synonyms : heterogeneous nuclear ribonucleoprotein U like 1 / HNRNPUL1 / Q9BUJ2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.2
Gene start: 41262496
Gene end: 41307598
  
Corresponding Affymetrix probe sets: 208713_at (Human Genome U133 Plus 2.0 Array)   209675_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000472629
Ensembl peptide - ENSP00000472315
Ensembl peptide - ENSP00000473132
Ensembl peptide - ENSP00000484226
Ensembl peptide - ENSP00000478946
Ensembl peptide - ENSP00000473178
Ensembl peptide - ENSP00000263367
Ensembl peptide - ENSP00000340857
Ensembl peptide - ENSP00000367460
Ensembl peptide - ENSP00000375863
Ensembl peptide - ENSP00000469816
Ensembl peptide - ENSP00000469858
Ensembl peptide - ENSP00000469934
Ensembl peptide - ENSP00000470172
Ensembl peptide - ENSP00000470687
Ensembl peptide - ENSP00000470793
Ensembl peptide - ENSP00000471302
Ensembl peptide - ENSP00000472221
NCBI entrez gene - 11100     See in Manteia.
OMIM - 605800
RefSeq - XM_011526395
RefSeq - NM_001301016
RefSeq - NM_001321208
RefSeq - NM_001321211
RefSeq - NM_007040
RefSeq - NM_144732
RefSeq - XM_005258459
RefSeq - XM_005258461
RefSeq - XM_005258463
RefSeq - XM_005258464
RefSeq - XM_005258465
RefSeq - XM_011526392
RefSeq - XM_011526393
RefSeq - XM_011526394
RefSeq Peptide - NP_008971
RefSeq Peptide - NP_653333
RefSeq Peptide - NP_001287945
RefSeq Peptide - NP_001308137
RefSeq Peptide - NP_001308140
swissprot - M0R3F1
swissprot - B7Z4B8
swissprot - A0A0A0MRA5
swissprot - A0A087X1I2
swissprot - M0QYG9
swissprot - M0QYI8
swissprot - M0QYM5
swissprot - M0QYZ0
swissprot - M0QZV6
swissprot - M0R0K8
swissprot - M0R203
swissprot - Q9BUJ2
swissprot - A0A024R0J9
swissprot - M0R247
Ensembl - ENSG00000105323
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpul1ENSDARG00000040564Danio rerio
 hnrnpul1lENSDARG00000079780Danio rerio
 Q8VDM6ENSMUSG00000040725Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HNRNPU / Q00839 / heterogeneous nuclear ribonucleoprotein UENSG0000015318740
Q1KMD3 / HNRNPUL2 / heterogeneous nuclear ribonucleoprotein U like 2ENSG0000021475336
HNRNPUL2-BSCL2 / HNRNPUL2-BSCL2 readthrough (NMD candidate)ENSG0000023485735


Protein motifs (from Interpro)
Interpro ID Name
 IPR001870  B30.2/SPRY domain
 IPR003034  SAP domain
 IPR003877  SPRY domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR027025  Heterogeneous nuclear ribonucleoprotein U-like protein 1
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035778  Heterogeneous nuclear ribonucleoprotein U, SPRY domain
 IPR036361  SAP domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0009615 response to virus IEA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0019899 enzyme binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr