ENSDARG00000056929


Danio rerio

Features
Gene ID: ENSDARG00000056929
  
Biological name :kdm6bb
  
Synonyms : kdm6bb / lysine (K)-specific demethylase 6B, b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 22724059
Gene end: 22760659
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120451
NCBI entrez gene - 563644     See in Manteia.
swissprot - E9QG91
ZFIN ID - ZDB-GENE-040724-166
Ensembl - ENSDARG00000056929
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
kdm6ba / lysine (K)-specific demethylase 6B, a / KDM6B* / O15054* / Q5NCY0* / lysine demethylase 6B* / Lysine-specific demethylase 6B *ENSDARG0000008808734
kdm6a / lysine (K)-specific demethylase 6A / UTY* / O70546* / O14607* / O15550* / lysine demethylase 6A* / Lysine-specific demethylase 6A * / ubiquitously transcribed tetratricopeptide repe...ENSDARG0000006175924
kdm6al / lysine (K)-specific demethylase 6A, likeENSDARG0000005979421


Protein motifs (from Interpro)
Interpro ID Name
 IPR003347  JmjC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031101 fin regeneration IMP
 biological_processGO:0060319 primitive erythrocyte differentiation IMP
 biological_processGO:0071557 histone H3-K27 demethylation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0071558 histone demethylase activity (H3-K27 specific) IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001058 caudal fin caudal fin blastema decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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