ENSDARG00000057089


Danio rerio

Features
Gene ID: ENSDARG00000057089
  
Biological name :ftsj1
  
Synonyms : ftsj1 / FtsJ RNA methyltransferase homolog 1
  
Possible biological names infered from orthology : Q9UET6
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 21167837
Gene end: 21178751
  
Corresponding Affymetrix probe sets: Dr.2885.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113647
Ensembl peptide - ENSDARP00000147724
Ensembl peptide - ENSDARP00000124607
Ensembl peptide - ENSDARP00000074130
Ensembl peptide - ENSDARP00000113491
NCBI entrez gene - 492512     See in Manteia.
RefSeq - NM_001007384
RefSeq Peptide - NP_001007385
swissprot - F1QDU3
swissprot - E9QJK6
swissprot - F8W2U2
swissprot - E9QIQ0
ZFIN ID - ZDB-GENE-041114-83
Ensembl - ENSDARG00000057089
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FTSJ1ENSG00000068438Homo sapiens
 Ftsj1ENSMUSG00000031171Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002877  Ribosomal RNA methyltransferase FtsJ domain
 IPR015507  Ribosomal RNA large subunit methyltransferase E
 IPR028590  tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase, Trm7
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0002128 tRNA nucleoside ribose methylation IEA
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008175 tRNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr