ENSG00000068438


Homo sapiens

Features
Gene ID: ENSG00000068438
  
Biological name :FTSJ1
  
Synonyms : FTSJ1 / FtsJ RNA methyltransferase homolog 1 / Q9UET6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: p11.23
Gene start: 48476021
Gene end: 48486364
  
Corresponding Affymetrix probe sets: 205324_s_at (Human Genome U133 Plus 2.0 Array)   213937_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000326948
Ensembl peptide - ENSP00000380103
Ensembl peptide - ENSP00000019019
NCBI entrez gene - 24140     See in Manteia.
OMIM - 300499
RefSeq - XM_017029382
RefSeq - NM_012280
RefSeq - NM_177439
RefSeq - XM_005272595
RefSeq - XM_011543893
RefSeq - XM_011543894
RefSeq - XM_011543895
RefSeq - NM_001282157
RefSeq Peptide - NP_803188
RefSeq Peptide - NP_001269086
RefSeq Peptide - NP_036412
swissprot - B7Z4K4
swissprot - Q9UET6
swissprot - A0A024QYX5
Ensembl - ENSG00000068438
  
Related genetic diseases (OMIM): 309549 - Mental retardation, X-linked 9/44, 309549
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ftsj1ENSDARG00000057089Danio rerio
 Ftsj1ENSMUSG00000031171Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002877  Ribosomal RNA methyltransferase FtsJ domain
 IPR015507  Ribosomal RNA large subunit methyltransferase E
 IPR025786  Mononegavirus L protein 2-O-ribose methyltransferase
 IPR028590  tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase, Trm7
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0002128 tRNA nucleoside ribose methylation IEA
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006400 tRNA modification TAS
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008175 tRNA methyltransferase activity IEA
 molecular_functionGO:0009020 tRNA (guanosine-2"-O-)-methyltransferase activity EXP
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0052666 tRNA (cytosine-2"-O-)-methyltransferase activity EXP


Pathways (from Reactome)
Pathway description
tRNA modification in the nucleus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000179 Prominent lower lip "Increased thickness of the lower lip, leading to a prominent appearance of the lower lip." [HPO:curators]
Show

 HP:0000400 Large ears 
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 HP:0000629 Periorbital fullness 
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 HP:0000637 Wide palpebral fissures 
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 HP:0000717 Autism 
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 HP:0000750 Impaired language development 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001417 X-linked inheritance "A mode of inheritance that is observed for traits related to a gene encoded on the X chromosome." [HPO:curators]
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0002194 Delayed gross motor development 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0009832 Abnormality of the distal phalanges of the hand 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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