ENSDARG00000057234


Danio rerio

Features
Gene ID: ENSDARG00000057234
  
Biological name :chtopa
  
Synonyms : chromatin target of PRMT1a / chtopa
  
Possible biological names infered from orthology : chromatin target of PRMT1 / Chromatin target of PRMT1 protein / CHTOP / Q9CY57 / Q9Y3Y2
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 23897666
Gene end: 23918136
  
Corresponding Affymetrix probe sets: Dr.1786.1.S1_at (Zebrafish Array)   Dr.25280.1.A1_at (Zebrafish Array)   NM_199546_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000074293
Ensembl peptide - ENSDARP00000123102
NCBI entrez gene - 321491     See in Manteia.
RefSeq - NM_199546
RefSeq Peptide - NP_955840
swissprot - Q1L8S1
swissprot - Q7ZW44
ZFIN ID - ZDB-GENE-030131-210
Ensembl - ENSDARG00000057234
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHTOPENSGALG00000042129Gallus gallus
 CHTOPENSG00000160679Homo sapiens
 ChtopENSMUSG00000001017Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chtopb / chromatin target of PRMT1b / CHTOP* / Q9Y3Y2* / Q9CY57* / chromatin target of PRMT1* / Chromatin target of PRMT1 protein *ENSDARG0000007043038


Protein motifs (from Interpro)
Interpro ID Name
 IPR025715  Chromatin target of PRMT1 protein, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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