ENSGALG00000042129


Gallus gallus

Features
Gene ID: ENSGALG00000042129
  
Biological name :CHTOP
  
Synonyms : chromatin target of PRMT1 / CHTOP
  
Possible biological names infered from orthology : Chromatin target of PRMT1 protein / Q9CY57 / Q9Y3Y2
  
Species: Gallus gallus
  
Chr. number: 25
Strand: -1
Band:
Gene start: 1847674
Gene end: 1851786
  
Corresponding Affymetrix probe sets: Gga.13018.1.S1_at (Chicken Array)   Gga.13018.1.S1_s_at (Chicken Array)   Gga.15808.1.S1_at (Chicken Array)   GgaAffx.24337.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044969
Ensembl peptide - ENSGALP00000047959
NCBI entrez gene - 426357     See in Manteia.
RefSeq - XM_004948216
RefSeq - XM_015298558
RefSeq - XM_015298559
RefSeq - XM_424013
swissprot - A0A1D5P5J0
swissprot - A0A1D5NX76
Ensembl - ENSGALG00000042129
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chtopaENSDARG00000057234Danio rerio
 chtopbENSDARG00000070430Danio rerio
 CHTOPENSG00000160679Homo sapiens
 ChtopENSMUSG00000001017Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR025715  Chromatin target of PRMT1 protein, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0031062 positive regulation of histone methylation IEA
 biological_processGO:0032781 positive regulation of ATPase activity IEA
 biological_processGO:0051096 positive regulation of helicase activity IEA
 cellular_componentGO:0000346 transcription export complex IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 molecular_functionGO:0008327 methyl-CpG binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr