ENSG00000160679


Homo sapiens

Features
Gene ID: ENSG00000160679
  
Biological name :CHTOP
  
Synonyms : chromatin target of PRMT1 / CHTOP / Q9Y3Y2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q21.3
Gene start: 153633982
Gene end: 153646306
  
Corresponding Affymetrix probe sets: 202559_x_at (Human Genome U133 Plus 2.0 Array)   202560_s_at (Human Genome U133 Plus 2.0 Array)   209927_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000385228
Ensembl peptide - ENSP00000357683
Ensembl peptide - ENSP00000484038
Ensembl peptide - ENSP00000357675
Ensembl peptide - ENSP00000357676
Ensembl peptide - ENSP00000357679
NCBI entrez gene - 26097     See in Manteia.
OMIM - 614206
RefSeq - XM_017000993
RefSeq - NM_001206612
RefSeq - NM_001244664
RefSeq - NM_001317077
RefSeq - NM_015607
RefSeq Peptide - NP_001193541
RefSeq Peptide - NP_001231593
RefSeq Peptide - NP_001304006
RefSeq Peptide - NP_056422
swissprot - Q5T7Y7
swissprot - Q9Y3Y2
swissprot - X6R700
swissprot - A0A087X1B7
Ensembl - ENSG00000160679
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chtopaENSDARG00000057234Danio rerio
 chtopbENSDARG00000070430Danio rerio
 CHTOPENSGALG00000042129Gallus gallus
 ChtopENSMUSG00000001017Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR025715  Chromatin target of PRMT1 protein, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006369 termination of RNA polymerase II transcription TAS
 biological_processGO:0006405 RNA export from nucleus TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0008284 positive regulation of cell proliferation IMP
 biological_processGO:0031062 positive regulation of histone methylation IMP
 biological_processGO:0031124 mRNA 3"-end processing TAS
 biological_processGO:0032781 positive regulation of ATPase activity IDA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0051096 positive regulation of helicase activity IDA
 cellular_componentGO:0000346 transcription export complex IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008327 methyl-CpG binding IDA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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