ENSDARG00000057378


Danio rerio

Features
Gene ID: ENSDARG00000057378
  
Biological name :selenou1a
  
Synonyms : Q6PBP3 / selenoprotein U 1a / selenou1a
  
Possible biological names infered from orthology : FAM213A / family with sequence similarity 213 member A / Q9BRX8 / Q9CYH2 / Redox-regulatory protein FAM213A
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 18659325
Gene end: 18669575
  
Corresponding Affymetrix probe sets: Dr.5704.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117937
Ensembl peptide - ENSDARP00000149078
Ensembl peptide - ENSDARP00000120460
Ensembl peptide - ENSDARP00000118165
Ensembl peptide - ENSDARP00000115912
NCBI entrez gene - 323739     See in Manteia.
RefSeq - NM_001193525
RefSeq - NM_001354552
RefSeq - NM_001354553
RefSeq Peptide - NP_001180454
RefSeq Peptide - NP_001341481
RefSeq Peptide - NP_001341482
swissprot - A0A1I8SBP0
swissprot - A0A1I8S6Z3
swissprot - A0A1I8S6W9
swissprot - Q6PBP3
ZFIN ID - ZDB-GENE-030131-2459
Ensembl - ENSDARG00000057378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SELENOUENSGALG00000002421Gallus gallus
 Q9BRX8ENSG00000122378Homo sapiens
 Q9CYH2ENSMUSG00000021792Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
selenou1b / selenoprotein U1b / Q9BRX8* / FAM213A* / family with sequence similarity 213 member A*ENSDARG0000008705939
LO017725.1 / Q9BRX8* / FAM213A* / family with sequence similarity 213 member A*ENSDARG0000011720421
fam213b / family with sequence similarity 213, member B / Q8TBF2* / Q9DB60* / Prostamide/prostaglandin F synthase *ENSDARG0000002979518


Protein motifs (from Interpro)
Interpro ID Name
 IPR000866  Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
 IPR012336  Thioredoxin-like fold
 IPR032801  Peroxiredoxin-like FAM213/AAED1
 IPR032802  Peroxiredoxin-like FAM213A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IBA
 biological_processGO:0098869 cellular oxidant detoxification IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016209 antioxidant activity IBA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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