ENSDARG00000087059


Danio rerio

Features
Gene ID: ENSDARG00000087059
  
Biological name :selenou1b
  
Synonyms : selenoprotein U1b / selenou1b
  
Possible biological names infered from orthology : FAM213A / family with sequence similarity 213 member A / Q9BRX8 / Q9CYH2 / Redox-regulatory protein FAM213A
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 47778786
Gene end: 47782623
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000112443
NCBI entrez gene - 767744     See in Manteia.
RefSeq - NM_001076713
RefSeq Peptide - NP_001070181
swissprot - F1REN5
ZFIN ID - ZDB-GENE-060929-88
Ensembl - ENSDARG00000087059
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SELENOUENSGALG00000002421Gallus gallus
 Q9BRX8ENSG00000122378Homo sapiens
 Q9CYH2ENSMUSG00000021792Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6PBP3 / selenou1a / selenoprotein U 1a / Q9BRX8* / Q9CYH2* / FAM213A* / Redox-regulatory protein FAM213A * / family with sequence similarity 213 member A*ENSDARG0000005737857
LO017725.1 / Q9BRX8* / FAM213A* / family with sequence similarity 213 member A*ENSDARG0000011720431
fam213b / family with sequence similarity 213, member B / Q8TBF2* / Q9DB60* / Prostamide/prostaglandin F synthase *ENSDARG0000002979516


Protein motifs (from Interpro)
Interpro ID Name
 IPR032801  Peroxiredoxin-like FAM213/AAED1
 IPR032802  Peroxiredoxin-like FAM213A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IBA
 biological_processGO:0098869 cellular oxidant detoxification IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0016209 antioxidant activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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