Manteia

ENSDARG00000057562

Danio rerio

Features

Gene ID:	ENSDARG00000057562

Biological name :	polr3c

Synonyms :	polr3c / polymerase (RNA) III (DNA directed) polypeptide C

Possible biological names infered from orthology :	Q9BUI4 / Q9D483 / RNA polymerase III subunit C

Species:	Danio rerio

Chr. number:	16
Strand:	1
Band:
Gene start:	14249546
Gene end:	14280600

Corresponding Affymetrix probe sets:	Dr.20880.1.S1_at (Zebrafish Array) NM_200232_at (Zebrafish Genome Array with custom cdf files)

Cross references:	Ensembl peptide - ENSDARP00000059966 NCBI entrez gene - 393201 See in Manteia. RefSeq - NM_200232 RefSeq Peptide - NP_956526 swissprot - F1QNQ7 ZFIN ID - ZDB-GENE-040426-992 Ensembl - ENSDARG00000057562

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Paralog prediction (from Ensembl)

Paralog name

Similarity(%)

No match

Protein motifs (from Interpro)

Interpro ID	Name
IPR008806	RNA polymerase III Rpc82, C -terminal
IPR011991	ArsR-like helix-turn-helix domain
IPR013197	RNA polymerase III subunit RPC82-related, helix-turn-helix

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006351	transcription, DNA-templated	IEA
molecular_function	GO:0003677	DNA binding	IEA
molecular_function	GO:0003899	DNA-directed 5"-3" RNA polymerase activity	IEA

Pathways (from Reactome)

Pathway description

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr