ENSDARG00000058005


Danio rerio

Features
Gene ID: ENSDARG00000058005
  
Biological name :hgd
  
Synonyms : hgd / homogentisate 1,2-dioxygenase
  
Possible biological names infered from orthology : O09173 / Q93099
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 23959107
Gene end: 23975132
  
Corresponding Affymetrix probe sets: Dr.3529.1.S1_at (Zebrafish Array)   NM_152966_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000074936
Ensembl peptide - ENSDARP00000147060
NCBI entrez gene - 259189     See in Manteia.
RefSeq - NM_152966
RefSeq Peptide - NP_694498
swissprot - Q6P2V4
ZFIN ID - ZDB-GENE-020802-5
Ensembl - ENSDARG00000058005
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HGDENSGALG00000014966Gallus gallus
 HGDENSG00000113924Homo sapiens
 HgdENSMUSG00000022821Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005708  Homogentisate 1,2-dioxygenase
 IPR011051  RmlC-like cupin domain superfamily
 IPR014710  RmlC-like jelly roll fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006559 L-phenylalanine catabolic process IEA
 biological_processGO:0006570 tyrosine metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0004411 homogentisate 1,2-dioxygenase activity IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
Phenylalanine and tyrosine catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000058005 hgd / homogentisate 1,2-dioxygenase / O09173* / Q93099*  / complex






 

1 s.

 
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contact: otassy@igbmc.fr