Manteia

ENSDARG00000058958

Danio rerio

Features

Gene ID:	ENSDARG00000058958

Biological name :	trim35-7

Synonyms :	trim35-7 / tripartite motif containing 35-7

Possible biological names infered from orthology :	Q9UPQ4 / TRIM35 / tripartite motif containing 35

Species:	Danio rerio

Chr. number:	3
Strand:	-1
Band:
Gene start:	5344999
Gene end:	5362347

Corresponding Affymetrix probe sets:	Dr.14928.1.A1_at (Zebrafish Array)

Cross references:	Ensembl peptide - ENSDARP00000152276 Ensembl peptide - ENSDARP00000076333 Ensembl peptide - ENSDARP00000146070 NCBI entrez gene - 103908634 See in Manteia. RefSeq - XM_005163703 swissprot - F1QWI8 ZFIN ID - ZDB-GENE-050522-333 Ensembl - ENSDARG00000058958

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
TRIM35	ENSGALG00000016595	Gallus gallus
Q9UPQ4	ENSG00000104228	Homo sapiens
Trim35	ENSMUSG00000022043	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
trim35-7 / tripartite motif containing 35-7 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000104825	69
trim35-19 / tripartite motif containing 35-19 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000099639	66
trim35-23 / tripartite motif containing 35-23 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000102368	65
trim35-21 / tripartite motif containing 35-21 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000102303	65
trim35-24 / tripartite motif containing 35-24 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000099684	65
si:ch211-12p12.2 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000102219	64
trim35-25 / tripartite motif containing 35-25 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000101055	64
si:ch211-175l6.2 / TRIM35 (1 of many) / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000100721	64
trim35-22 / tripartite motif containing 35-22 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000102264	64
trim35-20 / tripartite motif containing 35-20 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000070847	63
si:dkey-37m8.11 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000040230	62
si:ch1073-324l1.1 / TRIM35 (1 of many) / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000095913	61
trim35-10 / tripartite motif containing 35-10 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000033071	60
trim35-3 / tripartite motif containing 35-3 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000052255	59
si:ch73-106l15.2 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000111097	58
trim35-33 / tripartite motif containing 35-33 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000060838	58
trim35-34 / tripartite motif containing 35-34 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000022271	57
trim35-39 / tripartite motif containing 35-39 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000071241	56
CU571315.1 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000031534	54
trim35-9 / tripartite motif containing 35-9 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*	ENSDARG00000039108	52

Protein motifs (from Interpro)

Interpro ID	Name
IPR000315	B-box-type zinc finger
IPR001841	Zinc finger, RING-type
IPR001870	B30.2/SPRY domain
IPR003877	SPRY domain
IPR003879	Butyrophylin-like, SPRY domain
IPR006574	SPRY-associated
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
IPR017907	Zinc finger, RING-type, conserved site
IPR027370	RING-type zinc-finger, LisH dimerisation motif

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005622	intracellular	IEA
molecular_function	GO:0008270	zinc ion binding	IEA
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr