ENSDARG00000070847


Danio rerio

Features
Gene ID: ENSDARG00000070847
  
Biological name :trim35-20
  
Synonyms : trim35-20 / tripartite motif containing 35-20
  
Possible biological names infered from orthology : Q9UPQ4 / TRIM35 / tripartite motif containing 35
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 36902352
Gene end: 36905600
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000037611
NCBI entrez gene - 445068     See in Manteia.
NCBI entrez gene - 563088     See in Manteia.
RefSeq - NM_001003462
RefSeq - NM_001045009
RefSeq Peptide - NP_001003462
RefSeq Peptide - NP_001038474
swissprot - F2Z4W9
ZFIN ID - ZDB-GENE-110920-8
Ensembl - ENSDARG00000070847
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM35ENSGALG00000016595Gallus gallus
 Q9UPQ4ENSG00000104228Homo sapiens
 Trim35ENSMUSG00000022043Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-37m8.11 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000004023087
si:ch1073-324l1.1 / TRIM35 (1 of many) / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009591380
trim35-33 / tripartite motif containing 35-33 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000006083880
trim35-21 / tripartite motif containing 35-21 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010230378
trim35-23 / tripartite motif containing 35-23 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010236878
si:ch211-175l6.2 / TRIM35 (1 of many) / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010072178
trim35-24 / tripartite motif containing 35-24 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009968477
trim35-19 / tripartite motif containing 35-19 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009963977
trim35-25 / tripartite motif containing 35-25 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010105576
trim35-22 / tripartite motif containing 35-22 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010226476
trim35-34 / tripartite motif containing 35-34 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000002227174
si:ch211-12p12.2 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010221972
trim35-10 / tripartite motif containing 35-10 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000003307169
trim35-3 / tripartite motif containing 35-3 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005225569
trim35-7 / tripartite motif containing 35-7 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005895869
trim35-39 / tripartite motif containing 35-39 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000007124166
CU571315.1 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000003153465
si:ch73-106l15.2 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000011109764
trim35-7 / tripartite motif containing 35-7 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010482563
trim35-9 / tripartite motif containing 35-9 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000003910860


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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