ENSDARG00000102303


Danio rerio

Features
Gene ID: ENSDARG00000102303
  
Biological name :trim35-21
  
Synonyms : trim35-21 / tripartite motif containing 35-21
  
Possible biological names infered from orthology : Q9UPQ4 / TRIM35 / tripartite motif containing 35
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 7904390
Gene end: 7912661
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136209
NCBI entrez gene - 561579     See in Manteia.
RefSeq - NM_001044964
RefSeq Peptide - NP_001038429
swissprot - A0A0R4IPB1
ZFIN ID - ZDB-GENE-060503-673
Ensembl - ENSDARG00000102303
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM35ENSGALG00000016595Gallus gallus
 Q9UPQ4ENSG00000104228Homo sapiens
 Trim35ENSMUSG00000022043Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim35-23 / tripartite motif containing 35-23 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010236886
si:ch211-175l6.2 / TRIM35 (1 of many) / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010072186
trim35-19 / tripartite motif containing 35-19 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009963984
trim35-24 / tripartite motif containing 35-24 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009968484
trim35-22 / tripartite motif containing 35-22 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010226481
trim35-25 / tripartite motif containing 35-25 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010105580
trim35-20 / tripartite motif containing 35-20 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000007084778
si:dkey-37m8.11 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000004023076
trim35-10 / tripartite motif containing 35-10 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000003307175
si:ch211-12p12.2 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010221975
si:ch1073-324l1.1 / TRIM35 (1 of many) / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000009591374
trim35-33 / tripartite motif containing 35-33 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000006083872
trim35-7 / tripartite motif containing 35-7 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005895871
trim35-39 / tripartite motif containing 35-39 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000007124168
trim35-34 / tripartite motif containing 35-34 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000002227167
trim35-3 / tripartite motif containing 35-3 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000005225567
CU571315.1 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000003153465
trim35-7 / tripartite motif containing 35-7 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000010482565
si:ch73-106l15.2 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000011109765
trim35-9 / tripartite motif containing 35-9 / Q9UPQ4* / TRIM35* / tripartite motif containing 35*ENSDARG0000003910863


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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