ENSDARG00000059227


Danio rerio

Features
Gene ID: ENSDARG00000059227
  
Biological name :fabp1b.1
  
Synonyms : fabp1b.1 / fatty acid binding protein 1b, tandem duplicate 1 / Q4VBT1
  
Possible biological names infered from orthology : FABP1 / fatty acid binding protein 1 / Fatty acid-binding protein, liver / P07148 / P12710
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 999421
Gene end: 1006174
  
Corresponding Affymetrix probe sets: Dr.24261.1.S1_at (Zebrafish Array)   NM_001024651_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124794
NCBI entrez gene - 554095     See in Manteia.
RefSeq - NM_001024651
RefSeq Peptide - NP_001019822
swissprot - F8W2A9
swissprot - Q4VBT1
ZFIN ID - ZDB-GENE-050522-96
Ensembl - ENSDARG00000059227
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FABP1ENSGALG00000015937Gallus gallus
 FABP1ENSG00000163586Homo sapiens
 Fabp1ENSMUSG00000054422Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q1AMT3 / fabp1a / fatty acid binding protein 1a, liver / FABP1* / P07148* / fatty acid binding protein 1*ENSDARG0000001935760
fabp6 / fatty acid binding protein 6, ileal (gastrotropin) / P51161* / P51162* / Gastrotropin * / fatty acid binding protein 6*ENSDARG0000004456644
Q9I8L5 / fabp10a / fatty acid binding protein 10a, liver basicENSDARG0000003843943
fabp1b.2 / fatty acid binding protein 1b, liver, tandem duplicate 2 / FABP1* / P07148* / P12710* / fatty acid binding protein 1* / Fatty acid-binding protein, liver *ENSDARG0000010339842
fabp10b / fatty acid binding protein 10b, liver basicENSDARG0000009110128


Protein motifs (from Interpro)
Interpro ID Name
 IPR000463  Cytosolic fatty-acid binding
 IPR012674  Calycin
 IPR031259  Intracellular lipid binding protein
 IPR031276  Liver basic fatty acid-binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0033993 response to lipid IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0005504 fatty acid binding ISS
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0032052 bile acid binding IEA


Pathways (from Reactome)
Pathway description
Triglyceride catabolism
Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000054323 pparab / peroxisome proliferator-activated receptor alpha b / PPARA* / P23204* / Q07869* / peroxisome proliferator activated receptor alpha*  / reaction
 ENSDARG00000060438 tbl1x / transducin beta like 1 X-linked / TBL1Y* / Q9QXE7* / O60907* / Q9BQ87* / transducin beta like 1 Y-linked* / F-box-like/WD repeat-containing protein TBL1X *  / reaction
 ENSDARG00000031777 pparaa / peroxisome proliferator-activated receptor alpha a / PPARA* / P23204* / Q07869* / peroxisome proliferator activated receptor alpha*  / reaction
 ENSDARG00000057737 rxraa / retinoid X receptor, alpha a / RXRA* / P19793* / P28700* / retinoid X receptor alpha*  / reaction
 ENSDARG00000008966 tbl1xr1b / transducin (beta)-like 1 X-linked receptor 1b / Q9BZK7* / Q8BHJ5* / TBL1XR1* / transducin beta like 1 X-linked receptor 1* / F-box-like/WD repeat-containing protein TBL1XR1 *  / reaction
 ENSDARG00000058696 tbl1xr1a / transducin (beta)-like 1 X-linked receptor 1a / Q9BZK7* / Q8BHJ5* / TBL1XR1* / transducin beta like 1 X-linked receptor 1* / F-box-like/WD repeat-containing protein TBL1XR1 *  / reaction






 

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