ENSDARG00000059362
Danio rerio | |
Features
| Gene ID: | ENSDARG00000059362 | | | | | Biological name : | cavin1b | | | | | Synonyms : | caveolae associated protein 1b / cavin1b | | | | | Possible biological names infered from orthology : | caveolae associated protein 1 / CAVIN1 / O54724 / Q6NZI2 | | | | | Species: | Danio rerio | | | | | Chr. number: | 24 | | Strand: | 1 | | Band: | | | Gene start: | 7631797 | | Gene end: | 7668158 | | | | | Corresponding Affymetrix probe sets: | Dr.19545.1.S1_at (Zebrafish Array) | | | | | Cross references: | Ensembl peptide - ENSDARP00000076902
Ensembl peptide - ENSDARP00000105965
Ensembl peptide - ENSDARP00000151250
NCBI entrez gene - 561082
See in Manteia.
swissprot - A3KP36
swissprot - A6NA21
ZFIN ID - ZDB-GENE-030131-5509
Ensembl - ENSDARG00000059362
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| cavin1a / caveolae associated protein 1a / CAVIN1* / O54724* / Q6NZI2* / caveolae associated protein 1* | ENSDARG00000076411 | 44 | | cavin2b / caveolae associated protein 2b / Q969G5* / CAVIN2* / CAVIN3* / Q63918* / Q91VJ2* / O95810* / caveolae associated protein 3* / caveolae associated protein 2* | ENSDARG00000071196 | 28 | | cavin4a / caveolae associated protein 4a / CAVIN4* / A2AMM0* / Q5BKX8* / caveolae associated protein 4* | ENSDARG00000038658 | 26 | | cavin2a / caveolae associated protein 2a / Q969G5* / CAVIN2* / CAVIN3* / Q63918* / Q91VJ2* / O95810* / caveolae associated protein 3* / caveolae associated protein 2* | ENSDARG00000027611 | 21 | | cavin4b / caveolae associated protein 4b / CAVIN4* / A2AMM0* / Q5BKX8* / caveolae associated protein 4* | ENSDARG00000056743 | 21 |
Protein motifs (from Interpro)
Gene Ontology (GO)
Pathways (from Reactome)
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000054 | pericardium | pericardium edematous , abnormal |
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| | ZFA:0000135 | notochord | notochord caveola decreased amount , abnormal
notochord cell increased distance notochord cell, abnormal
notochord increased fragility , abnormal
notochord damaged , abnormal
notochord damage , ameliorated
notochord decreased diameter , abnormal |
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| | ZFA:0001094 | whole organism | whole organism curved ventral , abnormal
whole organism increased curvature , abnormal
whole organism decreased amount , abnormal
whole organism decreased length , abnormal |
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| | ZFA:0005744 | notochord outer sheath cell | notochord outer sheath cell displaced to notochord central region, abnormal
notochord outer sheath cell metaplastic , abnormal
notochord outer sheath cell increased amount , abnormal
notochord outer sheath cell vacuole increased amount , abnormal
notochord outer sheath cell vacuole increased size , abnormal |
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| | ZFA:0005746 | notochord inner cell | notochord inner cell collapsed , abnormal
notochord inner cell metaplastic , abnormal
notochord inner cell plasma membrane broken , abnormal
notochord inner cell malformed , abnormal
notochord inner cell caveola malformed , abnormal
notochord inner cell plasma membrane has fewer parts of type notochord inner cell caveola, abnormal
notochord inner cell caveola neck increased width , abnormal
notochord inner cell caveola bulb decreased depth , abnormal |
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Interacting proteins (from Reactome)
| ENSDARG00000035066 | ubtf / upstream binding transcription factor, RNA polymerase I / P17480* / Q3USZ2* / P0CB47* / UBTFL1* / upstream binding transcription factor, RNA polymerase I-like 1* | / reaction / complex |
0 s.
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