ENSDARG00000059553


Danio rerio

Features
Gene ID: ENSDARG00000059553
  
Biological name :sympk
  
Synonyms : sympk / symplekin
  
Possible biological names infered from orthology : Q92797
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 61862199
Gene end: 61892917
  
Corresponding Affymetrix probe sets: Dr.4673.1.A1_at (Zebrafish Array)   XM_694383_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000077314
Ensembl peptide - ENSDARP00000113544
NCBI entrez gene - 570858     See in Manteia.
RefSeq - XM_005165573
RefSeq - XM_694383
swissprot - A2CET0
swissprot - A0A0R4I9D6
ZFIN ID - ZDB-GENE-060526-361
Ensembl - ENSDARG00000059553
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYMPKENSG00000125755Homo sapiens
 SympkENSMUSG00000023118Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR021850  Symplekin/Pta1
 IPR022075  Symplekin C-terminal
 IPR032460  Symplekin/Pta1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway
mRNA 3-end processing
Processing of Intronless Pre-mRNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr