ENSDARG00000059760


Danio rerio

Features
Gene ID: ENSDARG00000059760
  
Biological name :wdtc1
  
Synonyms : WD and tetratricopeptide repeats 1 / wdtc1
  
Possible biological names infered from orthology : Q80ZK9 / Q8N5D0
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 54947768
Gene end: 54978981
  
Corresponding Affymetrix probe sets: Dr.3831.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000099567
Ensembl peptide - ENSDARP00000129594
NCBI entrez gene - 570606     See in Manteia.
RefSeq - XM_005169770
RefSeq Peptide - NP_001124078
swissprot - X1WH82
swissprot - B3DJF2
ZFIN ID - ZDB-GENE-030131-3224
Ensembl - ENSDARG00000059760
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDTC1ENSGALG00000000943Gallus gallus
 WDTC1ENSG00000142784Homo sapiens
 Wdtc1ENSMUSG00000037622Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dcaf6 / ddb1 and cul4 associated factor 6 / Q58WW2* / Q9DC22*ENSDARG0000007831124
dcaf8 / DDB1 and CUL4 associated factor 8 / Q5TAQ9* / P0C7V8* / A6NGE4* / DCAF8L2* / DCAF8L1* / AL139011.2* / DDB1 and CUL4 associated factor 8 like 1* / DDB1 and CUL4 associated factor 8 like 2*ENSDARG0000000032420


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr