ENSDARG00000060127


Danio rerio

Features
Gene ID: ENSDARG00000060127
  
Biological name :adamts3
  
Synonyms : ADAM metallopeptidase with thrombospondin type 1 motif, 3 / adamts3
  
Possible biological names infered from orthology : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 / O15072
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 45322734
Gene end: 45532848
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000078846
NCBI entrez gene - 102467218     See in Manteia.
RefSeq - NM_001287096
RefSeq Peptide - NP_001274025
swissprot - E7FEN5
ZFIN ID - ZDB-GENE-110223-1
Ensembl - ENSDARG00000060127
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ADAMTS3ENSGALG00000011623Gallus gallus
 O15072ENSG00000156140Homo sapiens
 Adamts3ENSMUSG00000043635Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
adamts2 / ADAM metallopeptidase with thrombospondin type 1 motif, 2 / O95450* / Q8C9W3* / A disintegrin and metalloproteinase with thrombospondin motifs 2 *ENSDARG0000007593052
adamts14 / ADAM metallopeptidase with thrombospondin type 1 motif, 14 / Q8WXS8*ENSDARG0000007849441
adamts18 / ADAM metallopeptidase with thrombospondin type 1 motif, 18 / Q4VC17* / Q8TE60* / A disintegrin and metalloproteinase with thrombospondin motifs 18 *ENSDARG0000000199928
adamts16 / ADAM metallopeptidase with thrombospondin type 1 motif, 16 / Q8TE57*ENSDARG0000007464628
adamts6 / ADAM metallopeptidase with thrombospondin type 1 motif, 6 / Q9UKP5* / a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6*ENSDARG0000004198228
BX470176.1 / Q9UKP4* / ADAMTS7* / ADAM metallopeptidase with thrombospondin type 1 motif 7*ENSDARG0000010247827
adamts10 / ADAM metallopeptidase with thrombospondin type 1 motif, 10 / P58459* / Q9H324* / Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1...ENSDARG0000007518826
adamts12 / ADAM metallopeptidase with thrombospondin type 1 motif, 12 / P58397* / Q811B3* / A disintegrin and metalloproteinase with thrombospondin motifs 12 *ENSDARG0000006754926
adamts17 / ADAM metallopeptidase with thrombospondin type 1 motif, 17 / Q8TE56*ENSDARG0000007555524
CABZ01080056.1 / O95450* / ADAMTS2* / ADAM metallopeptidase with thrombospondin type 1 motif 2*ENSDARG0000011550418


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001590  Peptidase M12B, ADAM/reprolysin
 IPR002870  Peptidase M12B, propeptide
 IPR010294  ADAM-TS Spacer 1
 IPR010909  PLAC
 IPR024079  Metallopeptidase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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