ENSDARG00000041982


Danio rerio

Features
Gene ID: ENSDARG00000041982
  
Biological name :adamts6
  
Synonyms : ADAM metallopeptidase with thrombospondin type 1 motif, 6 / adamts6
  
Possible biological names infered from orthology : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 / Q9UKP5
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 11593998
Gene end: 11761927
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117393
NCBI entrez gene - 569099     See in Manteia.
swissprot - E7FCQ4
ZFIN ID - ZDB-GENE-091113-9
Ensembl - ENSDARG00000041982
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ADAMTS6ENSGALG00000014751Gallus gallus
 Q9UKP5ENSG00000049192Homo sapiens
 Adamts6ENSMUSG00000046169Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
adamts10 / ADAM metallopeptidase with thrombospondin type 1 motif, 10 / P58459* / Q9H324* / Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1...ENSDARG0000007518863
BX470176.1 / Q9UKP4* / ADAMTS7* / ADAM metallopeptidase with thrombospondin type 1 motif 7*ENSDARG0000010247839
adamts16 / ADAM metallopeptidase with thrombospondin type 1 motif, 16 / Q8TE57*ENSDARG0000007464637
adamts18 / ADAM metallopeptidase with thrombospondin type 1 motif, 18 / Q4VC17* / Q8TE60* / A disintegrin and metalloproteinase with thrombospondin motifs 18 *ENSDARG0000000199937
adamts12 / ADAM metallopeptidase with thrombospondin type 1 motif, 12 / P58397* / Q811B3* / A disintegrin and metalloproteinase with thrombospondin motifs 12 *ENSDARG0000006754937
adamts2 / ADAM metallopeptidase with thrombospondin type 1 motif, 2 / O95450* / Q8C9W3* / A disintegrin and metalloproteinase with thrombospondin motifs 2 *ENSDARG0000007593030
adamts17 / ADAM metallopeptidase with thrombospondin type 1 motif, 17 / Q8TE56*ENSDARG0000007555530
adamts3 / ADAM metallopeptidase with thrombospondin type 1 motif, 3 / O15072*ENSDARG0000006012729
adamts14 / ADAM metallopeptidase with thrombospondin type 1 motif, 14 / Q8WXS8*ENSDARG0000007849420
CABZ01080056.1 / O95450* / ADAMTS2* / ADAM metallopeptidase with thrombospondin type 1 motif 2*ENSDARG000001155048


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001590  Peptidase M12B, ADAM/reprolysin
 IPR002870  Peptidase M12B, propeptide
 IPR010294  ADAM-TS Spacer 1
 IPR010909  PLAC
 IPR024079  Metallopeptidase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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