ENSDARG00000060434


Danio rerio

Features
Gene ID: ENSDARG00000060434
  
Biological name :map1b
  
Synonyms : map1b / microtubule-associated protein 1B
  
Possible biological names infered from orthology : P14873 / P46821
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 35270859
Gene end: 35301800
  
Corresponding Affymetrix probe sets: Dr.14108.1.S1_at (Zebrafish Array)   Dr.21904.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000079577
NCBI entrez gene - 559032     See in Manteia.
RefSeq - NM_001128201
RefSeq Peptide - NP_001121673
swissprot - B2ZZ14
ZFIN ID - ZDB-GENE-130530-690
Ensembl - ENSDARG00000060434
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000014999Gallus gallus
 ENSGALG00000046283Gallus gallus
 MAP1BENSG00000131711Homo sapiens
 Map1bENSMUSG00000052727Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
map1ab / microtubule-associated protein 1Ab / MAP1A* / P78559* / Q9QYR6* / microtubule associated protein 1A* / Microtubule-associated protein 1A MAP1A heavy chain MAP1 light chain LC2*ENSDARG0000002204534
map1aa / microtubule-associated protein 1Aa / MAP1A* / P78559* / Q9QYR6* / microtubule associated protein 1A* / Microtubule-associated protein 1A MAP1A heavy chain MAP1 light chain LC2*ENSDARG0000005960132
map1sa / microtubule-associated protein 1Sa / MAP1S* / Q66K74* / Q8C052* / microtubule associated protein 1S* / Microtubule-associated protein 1S MAP1S heavy chain MAP1S light chain*ENSDARG0000006080526
map1sb / microtubule-associated protein 1Sb / MAP1S* / Q66K74* / Q8C052* / microtubule associated protein 1S* / Microtubule-associated protein 1S MAP1S heavy chain MAP1S light chain*ENSDARG0000006032625


Protein motifs (from Interpro)
Interpro ID Name
 IPR001279  Metallo-beta-lactamase
 IPR026074  Microtubule associated protein 1
 IPR027321  Microtubule-associated protein 1B


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IMP
 biological_processGO:0001840 neural plate development IMP
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0021915 neural tube development IMP
 biological_processGO:0031114 regulation of microtubule depolymerization IMP
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0008017 microtubule binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain disorganized , abnormal
Show

 ZFA:0000131 neural keel neural keel increased width , abnormal
neural keel microtubule cytoskeleton composition , abnormal
neural keel cell morphology , abnormal
Show

 ZFA:0000132 neural plate neural plate increased width , abnormal
neural plate cell migration decreased rate , abnormal
Show

 ZFA:0001094 whole organism whole organism has extra parts of type neural tube , abnormal
Show

 ZFA:0001135 neural tube neural tube closure , abnormal
neural tube increased width , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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