ENSDARG00000060805


Danio rerio

Features
Gene ID: ENSDARG00000060805
  
Biological name :map1sa
  
Synonyms : map1sa / microtubule-associated protein 1Sa
  
Possible biological names infered from orthology : MAP1S / microtubule associated protein 1S / Microtubule-associated protein 1S MAP1S heavy chain MAP1S light chain / Q66K74 / Q8C052
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 36794438
Gene end: 36829025
  
Corresponding Affymetrix probe sets: Dr.2265.1.A1_at (Zebrafish Array)   Dr.26141.1.A1_at (Zebrafish Array)   XM_686182_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000080499
Ensembl peptide - ENSDARP00000137630
NCBI entrez gene - 562808     See in Manteia.
RefSeq - XM_021473552
RefSeq - XM_686182
swissprot - F1Q828
swissprot - A0A0R4ISC3
ZFIN ID - ZDB-GENE-030131-3982
Ensembl - ENSDARG00000060805
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MAP1SENSGALG00000039108Gallus gallus
 MAP1SENSG00000130479Homo sapiens
 Map1sENSMUSG00000019261Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
map1sb / microtubule-associated protein 1Sb / MAP1S* / Q66K74* / Q8C052* / microtubule associated protein 1S* / Microtubule-associated protein 1S MAP1S heavy chain MAP1S light chain*ENSDARG0000006032645
map1b / microtubule-associated protein 1B / P46821*ENSDARG0000006043440
map1ab / microtubule-associated protein 1Ab / MAP1A* / P78559* / Q9QYR6* / microtubule associated protein 1A* / Microtubule-associated protein 1A MAP1A heavy chain MAP1 light chain LC2*ENSDARG0000002204538
map1aa / microtubule-associated protein 1Aa / MAP1A* / P78559* / Q9QYR6* / microtubule associated protein 1A* / Microtubule-associated protein 1A MAP1A heavy chain MAP1 light chain LC2*ENSDARG0000005960134


Protein motifs (from Interpro)
Interpro ID Name
 IPR001279  Metallo-beta-lactamase
 IPR015656  Microtubule associated protein 1A
 IPR026074  Microtubule associated protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IEA
 biological_processGO:0006915 apoptotic process IEA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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