ENSDARG00000060537


Danio rerio

Features
Gene ID: ENSDARG00000060537
  
Biological name :atad2b
  
Synonyms : atad2b / ATPase family, AAA domain containing 2B
  
Possible biological names infered from orthology : Q9ULI0
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 44582318
Gene end: 44792557
  
Corresponding Affymetrix probe sets: Dr.22047.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124818
Ensembl peptide - ENSDARP00000124922
Ensembl peptide - ENSDARP00000079851
NCBI entrez gene - 100331225     See in Manteia.
swissprot - E7FE14
swissprot - F8W286
swissprot - F8W5Z5
ZFIN ID - ZDB-GENE-110411-210
Ensembl - ENSDARG00000060537
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATAD2BENSGALG00000037872Gallus gallus
 ATAD2BENSG00000119778Homo sapiens
 Atad2bENSMUSG00000052812Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atad2 / ATPase family, AAA domain containing 2 / Q6PL18*ENSDARG0000007659042


Protein motifs (from Interpro)
Interpro ID Name
 IPR001487  Bromodomain
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR018359  Bromodomain, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031936 negative regulation of chromatin silencing IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IBA
 molecular_functionGO:0042393 histone binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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