ENSG00000119778


Homo sapiens

Features
Gene ID: ENSG00000119778
  
Biological name :ATAD2B
  
Synonyms : ATAD2B / ATPase family, AAA domain containing 2B / Q9ULI0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p23.3
Gene start: 23748664
Gene end: 23927114
  
Corresponding Affymetrix probe sets: 1558807_at (Human Genome U133 Plus 2.0 Array)   213387_at (Human Genome U133 Plus 2.0 Array)   232908_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000392764
Ensembl peptide - ENSP00000403177
Ensembl peptide - ENSP00000238789
Ensembl peptide - ENSP00000370412
NCBI entrez gene - 54454     See in Manteia.
OMIM - 615347
RefSeq - XM_017004375
RefSeq - XM_011532920
RefSeq - XM_011532921
RefSeq - XM_011532924
RefSeq - XM_011532925
RefSeq - XM_011532928
RefSeq - XM_011532929
RefSeq - NM_001242338
RefSeq - NM_017552
RefSeq - XM_005264372
RefSeq - XM_006712030
RefSeq - XM_006712031
RefSeq - XM_011532918
RefSeq - XM_011532919
RefSeq Peptide - NP_001229267
RefSeq Peptide - NP_060022
swissprot - C9JG15
swissprot - H7BYF1
swissprot - Q9ULI0
swissprot - C9J1G9
Ensembl - ENSG00000119778
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atad2bENSDARG00000060537Danio rerio
 ATAD2BENSGALG00000037872Gallus gallus
 Atad2bENSMUSG00000052812Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ATAD2 / Q6PL18 / ATPase family, AAA domain containing 2ENSG0000015680246


Protein motifs (from Interpro)
Interpro ID Name
 IPR001487  Bromodomain
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR018359  Bromodomain, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR036427  Bromodomain-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031936 negative regulation of chromatin silencing IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IBA
 molecular_functionGO:0070577 lysine-acetylated histone binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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