ENSDARG00000060618


Danio rerio

Features
Gene ID: ENSDARG00000060618
  
Biological name :ipo13
  
Synonyms : importin 13 / ipo13
  
Possible biological names infered from orthology : O94829 / Q8K0C1
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 48292634
Gene end: 48407944
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000080059
NCBI entrez gene - 100319138     See in Manteia.
swissprot - F1Q9F5
ZFIN ID - ZDB-GENE-070706-1
Ensembl - ENSDARG00000060618
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IPO13ENSGALG00000010087Gallus gallus
 IPO13ENSG00000117408Homo sapiens
 Ipo13ENSMUSG00000033365Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch73-182a11.2ENSDARG0000007699666
tnpo3 / transportin 3 / Q6P2B1* / Q9Y5L0* / Mus musculus transportin 3 (Tnpo3), transcript variant 2, mRNA.*ENSDARG0000004568022


Protein motifs (from Interpro)
Interpro ID Name
 IPR001494  Importin-beta, N-terminal domain
 IPR011989  Armadillo-like helical
 IPR013598  Exportin-1/Importin-beta-like
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0006886 intracellular protein transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0031965 nuclear membrane IBA
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0008536 Ran GTPase binding IEA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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