ENSMUSG00000033365


Mus musculus

Features
Gene ID: ENSMUSG00000033365
  
Biological name :Ipo13
  
Synonyms : Importin-13 / Ipo13 / Q8K0C1
  
Possible biological names infered from orthology : O94829
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.1
Gene start: 117894486
Gene end: 117914999
  
Corresponding Affymetrix probe sets: 10515536 (MoGene1.0st)   1433464_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000035989
NCBI entrez gene - 230673     See in Manteia.
MGI - MGI:2385205
RefSeq - NM_146152
RefSeq Peptide - NP_666264
swissprot - Q8K0C1
Ensembl - ENSMUSG00000033365
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ipo13ENSDARG00000060618Danio rerio
 IPO13ENSGALG00000010087Gallus gallus
 IPO13ENSG00000117408Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tnpo3 / Q6P2B1 / Mus musculus transportin 3 (Tnpo3), transcript variant 2, mRNA. / Q9Y5L0* / transportin 3*ENSMUSG0000001253522


Protein motifs (from Interpro)
Interpro ID Name
 IPR001494  Importin-beta, N-terminal domain
 IPR011989  Armadillo-like helical
 IPR013598  Exportin-1/Importin-beta-like
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006606 protein import into nucleus IEA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0031965 nuclear membrane IBA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0008536 Ran GTPase binding IEA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Shhtm1(EGFP/cre)Cjt/Shh+,Sox17tm1Ysk/Sox17+
Genetic Background: involves: 129S1/Sv * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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