ENSMUSG00000012535


Mus musculus

Features
Gene ID: ENSMUSG00000012535
  
Biological name :Tnpo3
  
Synonyms : Mus musculus transportin 3 (Tnpo3), transcript variant 2, mRNA. / Q6P2B1 / Tnpo3
  
Possible biological names infered from orthology : Q9Y5L0 / transportin 3
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: A3.3
Gene start: 29540827
Gene end: 29609887
  
Corresponding Affymetrix probe sets: 10543650 (MoGene1.0st)   1419950_s_at (Mouse Genome 430 2.0 Array)   1429369_at (Mouse Genome 430 2.0 Array)   1453124_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000012679
Ensembl peptide - ENSMUSP00000110906
Ensembl peptide - ENSMUSP00000131411
Ensembl peptide - ENSMUSP00000133115
NCBI entrez gene - 320938     See in Manteia.
MGI - MGI:1196412
RefSeq - XM_017321650
RefSeq - NM_001347079
RefSeq - NM_177296
RefSeq - XM_006505119
RefSeq - XM_006505121
RefSeq Peptide - NP_796270
RefSeq Peptide - NP_001334008
swissprot - F6TDZ2
swissprot - Q6P2B1
swissprot - E9Q0H8
Ensembl - ENSMUSG00000012535
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnpo3ENSDARG00000045680Danio rerio
 TNPO3ENSGALG00000039420Gallus gallus
 TNPO3ENSG00000064419Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ipo13 / Q8K0C1 / Importin-13 / O94829*ENSMUSG0000003336522


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR013598  Exportin-1/Importin-beta-like
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0035048 obsolete splicing factor protein import into nucleus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0031965 nuclear membrane IBA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0008565 protein transporter activity IBA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0008762 embryonic lethality "death of an animal in the embryonic period (Mus: up to E14)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Btkm2Anu/Btkm2Anu
Genetic Background: C57BL/6NCrlAnu-Btkm2Anu

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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