ENSDARG00000060695


Danio rerio

Features
Gene ID: ENSDARG00000060695
  
Biological name :znf346
  
Synonyms : zinc finger protein 346 / znf346
  
Possible biological names infered from orthology : Q9R0B7 / Q9UL40 / Zfp346
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 37090585
Gene end: 37111264
  
Corresponding Affymetrix probe sets: Dr.25059.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000080221
Ensembl peptide - ENSDARP00000151939
swissprot - F1Q771
ZFIN ID - ZDB-GENE-070209-152
Ensembl - ENSDARG00000060695
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZNF346ENSGALG00000001144Gallus gallus
 Q9UL40ENSG00000113761Homo sapiens
 Q9R0B7ENSMUSG00000021481Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zmat4a / zinc finger, matrin-type 4a / ZMAT4* / Q8BZ94* / Q9H898* / zinc finger matrin-type 4*ENSDARG0000009298731
zgc:114104 / ZMAT1* / KRCC1* / Q5H9K5* / Q99JT5* / Q9NPI7* / zinc finger matrin-type 1* / lysine rich coiled-coil 1* / Lysine-rich coiled-coil protein 1 *ENSDARG0000005867930
zmat4b / zinc finger, matrin-type 4b / ZMAT4* / Q8BZ94* / Q9H898* / zinc finger matrin-type 4*ENSDARG0000006141930
zgc:171482ENSDARG0000007441517


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type
 IPR022755  Zinc finger, double-stranded RNA binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr