ENSMUSG00000021481


Mus musculus

Features
Gene ID: ENSMUSG00000021481
  
Biological name :Zfp346
  
Synonyms : Q9R0B7 / Zfp346 / zinc finger protein 346
  
Possible biological names infered from orthology : Q9UL40 / ZNF346
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: B1
Gene start: 55105311
Gene end: 55134825
  
Corresponding Affymetrix probe sets: 10405372 (MoGene1.0st)   1417088_at (Mouse Genome 430 2.0 Array)   1448581_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000124107
Ensembl peptide - ENSMUSP00000125743
Ensembl peptide - ENSMUSP00000125389
Ensembl peptide - ENSMUSP00000125204
Ensembl peptide - ENSMUSP00000125078
Ensembl peptide - ENSMUSP00000124397
Ensembl peptide - ENSMUSP00000124180
Ensembl peptide - ENSMUSP00000021937
Ensembl peptide - ENSMUSP00000124034
NCBI entrez gene - 26919     See in Manteia.
MGI - MGI:1349417
RefSeq - NM_012017
RefSeq - XM_006517259
RefSeq - XM_006517260
RefSeq Peptide - NP_036147
swissprot - E0CY94
swissprot - E9Q7N8
swissprot - Q9R0B7
swissprot - F7CTY2
swissprot - E9PYN2
swissprot - E0CZ32
swissprot - E0CYN4
swissprot - E0CYH6
Ensembl - ENSMUSG00000021481
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znf346ENSDARG00000060695Danio rerio
 ZNF346ENSGALG00000001144Gallus gallus
 Q9UL40ENSG00000113761Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zmat4 / Q8BZ94 / zinc finger, matrin type 4 / Q9H898*ENSMUSG0000003749230
Zmat1 / zinc finger, matrin type 1 / Q5H9K5*ENSMUSG000000526769
Krcc1 / Q99JT5 / Lysine-rich coiled-coil protein 1 / Q9NPI7* / lysine rich coiled-coil 1*ENSMUSG000000530124


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type
 IPR026939  At2g23090-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043065 positive regulation of apoptotic process IMP
 biological_processGO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IBA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0002039 p53 binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003725 double-stranded RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0035198 miRNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002590 increased mean corpuscular volume "greater than the average amount of space occupied by each red blood cell, calculated from the hematocrit and red cell count, in erythrocyte indices" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Trip13tm1.1(KOMP)Vlcg/Trip13tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Trip13tm1.1(KOMP)Vlcg/Ucd

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Trip13tm1.1(KOMP)Vlcg/Trip13tm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Trip13tm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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