ENSMUSG00000037492


Mus musculus

Features
Gene ID: ENSMUSG00000037492
  
Biological name :Zmat4
  
Synonyms : Q8BZ94 / zinc finger, matrin type 4 / Zmat4
  
Possible biological names infered from orthology : Q9H898
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: A2
Gene start: 23636019
Gene end: 24156585
  
Corresponding Affymetrix probe sets: 10570963 (MoGene1.0st)   1433959_at (Mouse Genome 430 2.0 Array)   1438113_at (Mouse Genome 430 2.0 Array)   1459628_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000049430
Ensembl peptide - ENSMUSP00000121337
Ensembl peptide - ENSMUSP00000121626
Ensembl peptide - ENSMUSP00000146734
Ensembl peptide - ENSMUSP00000115719
NCBI entrez gene - 320158     See in Manteia.
MGI - MGI:2443497
RefSeq - XM_017312858
RefSeq - XM_006509140
RefSeq - XM_006509141
RefSeq - XM_006509142
RefSeq - XM_011242141
RefSeq - XM_011242142
RefSeq - NM_001277239
RefSeq - NM_177086
RefSeq - XM_006509139
RefSeq Peptide - NP_001264168
RefSeq Peptide - NP_796060
swissprot - D3Z339
swissprot - Q8BZ94
swissprot - D3YYX6
Ensembl - ENSMUSG00000037492
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmat4aENSDARG00000092987Danio rerio
 zmat4bENSDARG00000061419Danio rerio
 ZMAT4ENSGALG00000003470Gallus gallus
 ZMAT4ENSG00000165061Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9R0B7 / Zfp346 / zinc finger protein 346 / Q9UL40* / ZNF346*ENSMUSG0000002148138
Zmat1 / zinc finger, matrin type 1 / Q5H9K5*ENSMUSG0000005267610
Krcc1 / Q99JT5 / Lysine-rich coiled-coil protein 1 / Q9NPI7* / lysine rich coiled-coil 1*ENSMUSG000000530124


Protein motifs (from Interpro)
Interpro ID Name
 IPR000690  Matrin/U1-C, C2H2-type zinc finger
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type
 IPR022755  Zinc finger, double-stranded RNA binding
 IPR026939  At2g23090-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0002039 p53 binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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