ENSG00000165061


Homo sapiens

Features
Gene ID: ENSG00000165061
  
Biological name :ZMAT4
  
Synonyms : Q9H898 / zinc finger matrin-type 4 / ZMAT4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: p11.21
Gene start: 40530590
Gene end: 40897833
  
Corresponding Affymetrix probe sets: 219877_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000427918
Ensembl peptide - ENSP00000430050
Ensembl peptide - ENSP00000429068
Ensembl peptide - ENSP00000428423
Ensembl peptide - ENSP00000297737
Ensembl peptide - ENSP00000319785
NCBI entrez gene - 79698     See in Manteia.
RefSeq - XM_017013836
RefSeq - NM_001135731
RefSeq - NM_024645
RefSeq Peptide - NP_001129203
RefSeq Peptide - NP_078921
swissprot - Q9H898
swissprot - E5RIF5
swissprot - E5RGZ7
swissprot - E5RFW2
Ensembl - ENSG00000165061
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmat4aENSDARG00000092987Danio rerio
 zmat4bENSDARG00000061419Danio rerio
 ZMAT4ENSGALG00000003470Gallus gallus
 Zmat4ENSMUSG00000037492Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UL40 / ZNF346 / zinc finger protein 346ENSG0000011376139
ZMAT1 / Q5H9K5 / zinc finger matrin-type 1ENSG0000016643212
KRCC1 / Q9NPI7 / lysine rich coiled-coil 1ENSG000001720864


Protein motifs (from Interpro)
Interpro ID Name
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type
 IPR022755  Zinc finger, double-stranded RNA binding
 IPR026939  At2g23090-like
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0002039 p53 binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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