ENSDARG00000061274


Danio rerio

Features
Gene ID: ENSDARG00000061274
  
Biological name :lss
  
Synonyms : lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) / lss
  
Possible biological names infered from orthology : lanosterol synthase / P48449 / Q8BLN5
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 38481780
Gene end: 38500391
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000081675
NCBI entrez gene - 795400     See in Manteia.
RefSeq - NM_001083567
RefSeq Peptide - NP_001077036
swissprot - B0S5M5
ZFIN ID - ZDB-GENE-050119-7
Ensembl - ENSDARG00000061274
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LSSENSGALG00000006198Gallus gallus
 LSSENSG00000160285Homo sapiens
 LssENSMUSG00000033105Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002365  Terpene synthase, conserved site
 IPR008930  Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
 IPR018333  Squalene cyclase
 IPR032696  Squalene cyclase, C-terminal
 IPR032697  Squalene cyclase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0016866 intramolecular transferase activity IEA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr