ENSGALG00000006198


Gallus gallus

Features
Gene ID: ENSGALG00000006198
  
Biological name :LSS
  
Synonyms : lanosterol synthase / LSS
  
Possible biological names infered from orthology : P48449 / Q8BLN5
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 6905294
Gene end: 6915375
  
Corresponding Affymetrix probe sets: Gga.1922.3.S1_s_at (Chicken Array)   GgaAffx.12964.1.S1_s_at (Chicken Array)   GgaAffx.3863.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009988
Ensembl peptide - ENSGALP00000063343
Ensembl peptide - ENSGALP00000055152
Ensembl peptide - ENSGALP00000050905
NCBI entrez gene - 424037     See in Manteia.
RefSeq - NM_001006514
RefSeq Peptide - NP_001006514
swissprot - A0A1L1RWX9
swissprot - A0A1D5PQI7
swissprot - A0A1D5PDR0
swissprot - F1NED1
Ensembl - ENSGALG00000006198
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lssENSDARG00000061274Danio rerio
 LSSENSG00000160285Homo sapiens
 LssENSMUSG00000033105Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002365  Terpene synthase, conserved site
 IPR008930  Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
 IPR018333  Squalene cyclase
 IPR032696  Squalene cyclase, C-terminal
 IPR032697  Squalene cyclase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006694 steroid biosynthetic process IEA
 biological_processGO:0006695 cholesterol biosynthetic process IEA
 biological_processGO:0031647 regulation of protein stability IEA
 cellular_componentGO:0005811 lipid droplet IEA
 molecular_functionGO:0000250 lanosterol synthase activity IEA
 molecular_functionGO:0016853 isomerase activity IEA
 molecular_functionGO:0016866 intramolecular transferase activity IEA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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