ENSDARG00000061375


Danio rerio

Features
Gene ID: ENSDARG00000061375
  
Biological name :sgpl1
  
Synonyms : sgpl1 / sphingosine-1-phosphate lyase 1
  
Possible biological names infered from orthology : O95470 / Q8R0X7
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 25725547
Gene end: 25750910
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000121475
Ensembl peptide - ENSDARP00000147330
Ensembl peptide - ENSDARP00000098071
NCBI entrez gene - 100037312     See in Manteia.
RefSeq - NM_001089469
RefSeq Peptide - NP_001082938
swissprot - A4QNU7
swissprot - F1R912
ZFIN ID - ZDB-GENE-070410-24
Ensembl - ENSDARG00000061375
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SGPL1ENSGALG00000004553Gallus gallus
 SGPL1ENSG00000166224Homo sapiens
 Sgpl1ENSMUSG00000020097Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002129  Pyridoxal phosphate-dependent decarboxylase
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019752 carboxylic acid metabolic process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0016831 carboxy-lyase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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