ENSDARG00000061411


Danio rerio

Features
Gene ID: ENSDARG00000061411
  
Biological name :nelfa
  
Synonyms : negative elongation factor complex member A / nelfa
  
Possible biological names infered from orthology : Negative elongation factor A / Q8BG30 / Q9H3P2
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 24491966
Gene end: 24508677
  
Corresponding Affymetrix probe sets: Dr.17275.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124577
Ensembl peptide - ENSDARP00000130626
Ensembl peptide - ENSDARP00000124962
Ensembl peptide - ENSDARP00000082002
NCBI entrez gene - 559677     See in Manteia.
RefSeq - NM_001173501
RefSeq Peptide - NP_001166972
swissprot - F8W2X2
swissprot - E7FFE0
swissprot - F8W5V5
swissprot - A0A0R4IBP1
ZFIN ID - ZDB-GENE-030131-6400
Ensembl - ENSDARG00000061411
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NELFAENSGALG00000015699Gallus gallus
 NELFAENSG00000185049Homo sapiens
 NelfaENSMUSG00000029111Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Formation of RNA Pol II elongation complex
Formation of the Early Elongation Complex
RNA Polymerase II Pre-transcription Events
TP53 Regulates Transcription of DNA Repair Genes
RNA Polymerase II Transcription Elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000042724 supt5h / SPT5 homolog, DSIF elongation factor subunit / Supt5* / O55201* / O00267* / Transcription elongation factor SPT5 *  / reaction / complex
 ENSDARG00000014898 ncbp2 / Q8JGR6 / nuclear cap binding protein subunit 2 / Q9CQ49* / NCBP2L* / P52298* / A6PVI3* / nuclear cap binding protein subunit 2 like*  / complex / reaction
 ENSDARG00000004343 nelfe / negative elongation factor complex member E / P18615* / P19426* / negative elongation factor complex member E, Rdbp*  / complex
 ENSDARG00000113969 Q6DGQ0 / supt4h1 / SPT4 homolog, DSIF elongation factor subunit / P63272*  / reaction / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr