ENSDARG00000061854


Danio rerio

Features
Gene ID: ENSDARG00000061854
  
Biological name :lman2
  
Synonyms : lectin, mannose-binding 2 / lman2
  
Possible biological names infered from orthology : Q12907 / Q9DBH5 / Vesicular integral-membrane protein VIP36
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 26413417
Gene end: 26425416
  
Corresponding Affymetrix probe sets: Dr.11546.1.A1_at (Zebrafish Array)   NM_001081747_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000083123
NCBI entrez gene - 557960     See in Manteia.
RefSeq - NM_001081747
RefSeq Peptide - NP_001075216
swissprot - A5PMC4
ZFIN ID - ZDB-GENE-070209-149
Ensembl - ENSDARG00000061854
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LMAN2ENSGALG00000033232Gallus gallus
 LMAN2ENSG00000169223Homo sapiens
 Lman2ENSMUSG00000021484Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lman2lb / lectin, mannose-binding 2-like b / LMAN2L* / Q9H0V9* / lectin, mannose binding 2 like*ENSDARG0000008866345
lman2la / lectin, mannose-binding 2-like a / LMAN2L* / Q9H0V9* / lectin, mannose binding 2 like*ENSDARG0000010265739
lman1 / lectin, mannose-binding, 1 / P49257* / Q9D0F3* / Protein ERGIC-53 *ENSDARG0000006998024


Protein motifs (from Interpro)
Interpro ID Name
 IPR005052  Legume-like lectin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR035664  VIP36, lectin domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr