ENSDARG00000069980


Danio rerio

Features
Gene ID: ENSDARG00000069980
  
Biological name :lman1
  
Synonyms : lectin, mannose-binding, 1 / lman1
  
Possible biological names infered from orthology : P49257 / Protein ERGIC-53 / Q9D0F3
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 10701834
Gene end: 10732281
  
Corresponding Affymetrix probe sets: Dr.6822.1.A1_at (Zebrafish Array)   XM_683569_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000093080
Ensembl peptide - ENSDARP00000108644
Ensembl peptide - ENSDARP00000149320
NCBI entrez gene - 559775     See in Manteia.
RefSeq - XM_683569
swissprot - F1QWL4
swissprot - F1R429
ZFIN ID - ZDB-GENE-060201-4
Ensembl - ENSDARG00000069980
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LMAN1ENSGALG00000034821Gallus gallus
 LMAN1ENSG00000074695Homo sapiens
 Lman1ENSMUSG00000041891Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lman2lb / lectin, mannose-binding 2-like b / LMAN2L* / Q9H0V9* / lectin, mannose binding 2 like*ENSDARG0000008866317
lman2 / lectin, mannose-binding 2 / Q12907* / Q9DBH5* / Vesicular integral-membrane protein VIP36 *ENSDARG0000006185417
lman2la / lectin, mannose-binding 2-like a / LMAN2L* / Q9H0V9* / lectin, mannose binding 2 like*ENSDARG0000010265715


Protein motifs (from Interpro)
Interpro ID Name
 IPR005052  Legume-like lectin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR033085  Protein ERGIC-53


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005537 mannose binding IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER
Transport to the Golgi and subsequent modification


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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