ENSDARG00000062060


Danio rerio

Features
Gene ID: ENSDARG00000062060
  
Biological name :gmeb1
  
Synonyms : glucocorticoid modulatory element binding protein 1 / gmeb1
  
Possible biological names infered from orthology : Q9JL60 / Q9Y692
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 16064439
Gene end: 16089187
  
Corresponding Affymetrix probe sets: Dr.9381.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000125781
Ensembl peptide - ENSDARP00000122476
Ensembl peptide - ENSDARP00000116054
NCBI entrez gene - 567701     See in Manteia.
RefSeq - XM_005159542
RefSeq - XM_021468121
RefSeq Peptide - NP_001188372
swissprot - F6PF83
swissprot - F1QN94
ZFIN ID - ZDB-GENE-060503-35
Ensembl - ENSDARG00000062060
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GMEB1ENSGALG00000038488Gallus gallus
 GMEB1ENSG00000162419Homo sapiens
 Gmeb1ENSMUSG00000028901Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GMEB2 / si:ch73-302a13.2 / P58929* / Q9UKD1* / glucocorticoid modulatory element binding protein 2*ENSDARG0000009324026


Protein motifs (from Interpro)
Interpro ID Name
 IPR000770  SAND domain
 IPR010919  SAND-like domain superfamily
 IPR024830  Glucocorticoid modulatory element-binding protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr