ENSMUSG00000028901


Mus musculus

Features
Gene ID: ENSMUSG00000028901
  
Biological name :Gmeb1
  
Synonyms : glucocorticoid modulatory element binding protein 1 / Gmeb1 / Q9JL60
  
Possible biological names infered from orthology : Q9Y692
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.3
Gene start: 132221025
Gene end: 132261602
  
Corresponding Affymetrix probe sets: 10516867 (MoGene1.0st)   1421003_at (Mouse Genome 430 2.0 Array)   1429942_at (Mouse Genome 430 2.0 Array)   1442601_at (Mouse Genome 430 2.0 Array)   1450086_at (Mouse Genome 430 2.0 Array)   1456232_at (Mouse Genome 430 2.0 Array)   1458896_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030733
Ensembl peptide - ENSMUSP00000101584
Ensembl peptide - ENSMUSP00000101585
Ensembl peptide - ENSMUSP00000131331
NCBI entrez gene - 56809     See in Manteia.
MGI - MGI:2135604
RefSeq - XM_017320332
RefSeq - NM_001122992
RefSeq - NM_020273
RefSeq - XM_006539078
RefSeq - XM_006539079
RefSeq - XM_006539080
RefSeq Peptide - NP_064669
RefSeq Peptide - NP_001116464
swissprot - Q9JL60
Ensembl - ENSMUSG00000028901
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gmeb1ENSDARG00000062060Danio rerio
 GMEB1ENSGALG00000038488Gallus gallus
 GMEB1ENSG00000162419Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gmeb2 / P58929 / glucocorticoid modulatory element binding protein 2 / Q9UKD1*ENSMUSG0000003870538


Protein motifs (from Interpro)
Interpro ID Name
 IPR000770  SAND domain
 IPR010919  SAND-like domain superfamily
 IPR024830  Glucocorticoid modulatory element-binding protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr