ENSG00000162419


Homo sapiens

Features
Gene ID: ENSG00000162419
  
Biological name :GMEB1
  
Synonyms : glucocorticoid modulatory element binding protein 1 / GMEB1 / Q9Y692
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p35.3
Gene start: 28668732
Gene end: 28719353
  
Corresponding Affymetrix probe sets: 220938_s_at (Human Genome U133 Plus 2.0 Array)   230613_at (Human Genome U133 Plus 2.0 Array)   235232_at (Human Genome U133 Plus 2.0 Array)   235233_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000362922
Ensembl peptide - ENSP00000294409
Ensembl peptide - ENSP00000355186
NCBI entrez gene - 10691     See in Manteia.
OMIM - 604409
RefSeq - XM_017000087
RefSeq - NM_001319674
RefSeq - NM_006582
RefSeq - NM_024482
RefSeq - XM_011540518
RefSeq - XM_011540519
RefSeq - XM_011540521
RefSeq - XM_011540522
RefSeq Peptide - NP_001306603
RefSeq Peptide - NP_006573
RefSeq Peptide - NP_077808
swissprot - B1AT47
swissprot - Q9Y692
Ensembl - ENSG00000162419
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gmeb1ENSDARG00000062060Danio rerio
 GMEB1ENSGALG00000038488Gallus gallus
 Gmeb1ENSMUSG00000028901Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GMEB2 / Q9UKD1 / glucocorticoid modulatory element binding protein 2ENSG0000010121637


Protein motifs (from Interpro)
Interpro ID Name
 IPR000770  SAND domain
 IPR010919  SAND-like domain superfamily
 IPR024830  Glucocorticoid modulatory element-binding protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003713 transcription coactivator activity TAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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