ENSDARG00000062123


Danio rerio

Features
Gene ID: ENSDARG00000062123
  
Biological name :agap1
  
Synonyms : agap1 / ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
  
Possible biological names infered from orthology : A6NIR3 / AGAP4 / AGAP5 / AGAP6 / AGAP9 / Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 / ArfGAP with GTPase domain, ankyrin repeat and PH domain 4 / ArfGAP with GTPase domain, ankyrin repeat and PH domain 5 / ArfGAP with GTPase domain, ankyrin repeat and PH domain 6 / ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 / Q5VTM2 / Q5VW22 / Q8BXK8 / Q96P64 / Q9UPQ3
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 16043318
Gene end: 16394528
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000083878
Ensembl peptide - ENSDARP00000144475
NCBI entrez gene - 100148154     See in Manteia.
swissprot - A0A286YBU1
swissprot - E7FBZ7
ZFIN ID - ZDB-GENE-130405-1
Ensembl - ENSDARG00000062123
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000004045Gallus gallus
 AGAP1ENSG00000157985Homo sapiens
 AGAP4ENSG00000188234Homo sapiens
 AGAP5ENSG00000172650Homo sapiens
 AGAP6ENSG00000204149Homo sapiens
 AGAP9ENSG00000204172Homo sapiens
 Agap1ENSMUSG00000055013Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
agap3 / ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 / Q96P47*ENSDARG0000008782269
agap2 / ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 / Q99490*ENSDARG0000009987448
asap1a / ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a / ASAP1* / Q9ULH1* / Q9QWY8* / ArfGAP with SH3 domain, ankyrin repeat and PH domain 1* / Arf-GAP with SH3 domain, ANK repeat...ENSDARG0000002946318
asap1b / ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b / ASAP1* / Q9ULH1* / Q9QWY8* / ArfGAP with SH3 domain, ankyrin repeat and PH domain 1* / Arf-GAP with SH3 domain, ANK repeat...ENSDARG0000003972918
asap2a / ArfGAP with SH3 domain, ankyrin repeat and PH domain 2a / ASAP2* / Q7SIG6* / O43150* / ArfGAP with SH3 domain, ankyrin repeat and PH domain 2* / Arf-GAP with SH3 domain, ANK repeat...ENSDARG0000001018117
acap3b / ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b / ACAP3* / Q96P50* / ArfGAP with coiled-coil, ankyrin repeat and PH domains 3*ENSDARG0000009924017
asap3 / ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 / Q5U464* / Q8TDY4* / Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 *ENSDARG0000002189617
asap2b / ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b / ASAP2* / Q7SIG6* / O43150* / ArfGAP with SH3 domain, ankyrin repeat and PH domain 2* / Arf-GAP with SH3 domain, ANK repeat...ENSDARG0000001956417
acap1 / ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 / Q15027* / Q8K2H4*ENSDARG0000005634616
acap2 / ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 / Q15057* / Q6ZQK5*ENSDARG0000006078316
zgc:162872ENSDARG0000001218416
si:ch211-168b3.1 / ACAP2* / Q15057* / Q6ZQK5* / ArfGAP with coiled-coil, ankyrin repeat and PH domains 2*ENSDARG0000005647816
unm_sa1614 / un-named sa1614ENSDARG0000000260716
acap3a / acap3b / ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a / ACAP3* / Q96P50* / ArfGAP with coiled-coil, ankyrin repeat and PH domains 3*ENSDARG0000007599014


Protein motifs (from Interpro)
Interpro ID Name
 IPR001164  Arf GTPase activating protein
 IPR001806  Small GTPase superfamily
 IPR001849  Pleckstrin homology domain
 IPR002110  Ankyrin repeat
 IPR011993  PH-like domain superfamily
 IPR020683  Ankyrin repeat-containing domain
 IPR020849  Small GTPase superfamily, Ras-type
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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