ENSDARG00000062442


Danio rerio

Features
Gene ID: ENSDARG00000062442
  
Biological name :meiob
  
Synonyms : meiob / meiosis specific with OB domains / msrb1b
  
Possible biological names infered from orthology : Meiosis-specific with OB domain-containing protein / Q8N635 / Q9D513
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 18529228
Gene end: 18543726
  
Corresponding Affymetrix probe sets: Dr.13967.1.A1_at (Zebrafish Array)   Dr.18622.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126655
Ensembl peptide - ENSDARP00000126852
Ensembl peptide - ENSDARP00000084022
Ensembl peptide - ENSDARP00000144926
Ensembl peptide - ENSDARP00000156277
NCBI entrez gene - 101882335     See in Manteia.
RefSeq - XM_021480292
swissprot - F1R891
swissprot - Q66HU0
swissprot - R4GDU8
swissprot - R4GED9
ZFIN ID - ZDB-GENE-040912-88
ZFIN ID - ZDB-GENE-120104-8
Ensembl - ENSDARG00000062442
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MEIOBENSGALG00000005411Gallus gallus
 MEIOBENSG00000162039Homo sapiens
 MeiobENSMUSG00000024155Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002579  Peptide methionine sulphoxide reductase MrsB
 IPR011057  Mss4-like superfamily
 IPR012340  Nucleic acid-binding, OB-fold
 IPR028427  Peptide methionine sulfoxide reductase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000712 resolution of meiotic recombination intermediates IBA
 biological_processGO:0006979 response to oxidative stress IEA
 biological_processGO:0030091 protein repair IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IBA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003697 single-stranded DNA binding IBA
 molecular_functionGO:0008310 single-stranded DNA 3"-5" exodeoxyribonuclease activity IBA
 molecular_functionGO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEA
 molecular_functionGO:0033743 peptide-methionine (R)-S-oxide reductase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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