ENSDARG00000063021


Danio rerio

Features
Gene ID: ENSDARG00000063021
  
Biological name :rpain
  
Synonyms : rpain / RPA interacting protein
  
Possible biological names infered from orthology : Q86UA6 / Q9CWY9
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 3891485
Gene end: 3908849
  
Corresponding Affymetrix probe sets: Dr.13849.1.S1_at (Zebrafish Array)   NM_001045388_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000116714
Ensembl peptide - ENSDARP00000108894
Ensembl peptide - ENSDARP00000086144
NCBI entrez gene - 751671     See in Manteia.
RefSeq - NM_001045388
RefSeq - XM_005171732
RefSeq Peptide - NP_001038853
swissprot - F1R0U0
swissprot - F1QKJ6
ZFIN ID - ZDB-GENE-060825-212
Ensembl - ENSDARG00000063021
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPAINENSGALG00000001666Gallus gallus
 RPAINENSG00000129197Homo sapiens
 RpainENSMUSG00000018449Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR028155  RPA-interacting protein, central domain
 IPR028156  RPA-interacting protein
 IPR028158  RPA-interacting protein, N-terminal domain
 IPR028159  RPA-interacting protein, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr