ENSG00000129197


Homo sapiens

Features
Gene ID: ENSG00000129197
  
Biological name :RPAIN
  
Synonyms : Q86UA6 / RPAIN / RPA interacting protein
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.2
Gene start: 5419641
Gene end: 5432876
  
Corresponding Affymetrix probe sets: 1556088_at (Human Genome U133 Plus 2.0 Array)   1558719_s_at (Human Genome U133 Plus 2.0 Array)   1564301_a_at (Human Genome U133 Plus 2.0 Array)   216961_s_at (Human Genome U133 Plus 2.0 Array)   216962_at (Human Genome U133 Plus 2.0 Array)   228183_s_at (Human Genome U133 Plus 2.0 Array)   228288_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000439939
Ensembl peptide - ENSP00000446453
Ensembl peptide - ENSP00000467178
Ensembl peptide - ENSP00000460354
Ensembl peptide - ENSP00000460162
Ensembl peptide - ENSP00000458699
Ensembl peptide - ENSP00000458218
Ensembl peptide - ENSP00000315069
Ensembl peptide - ENSP00000370605
Ensembl peptide - ENSP00000370606
Ensembl peptide - ENSP00000385814
NCBI entrez gene - 84268     See in Manteia.
OMIM - 617299
RefSeq - NM_001160266
RefSeq - NM_001033002
RefSeq - NM_001160243
RefSeq - NM_001160244
RefSeq - NM_001160246
RefSeq Peptide - NP_001153738
RefSeq Peptide - NP_001028174
RefSeq Peptide - NP_001153715
RefSeq Peptide - NP_001153716
RefSeq Peptide - NP_001153718
swissprot - Q86UA6
swissprot - B3KTT3
swissprot - A0A0B4J1T3
swissprot - A0A0A0MSE7
swissprot - A0A0A0MR35
swissprot - F5H3Q7
swissprot - E9PDG9
Ensembl - ENSG00000129197
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpainENSDARG00000063021Danio rerio
 RPAINENSGALG00000001666Gallus gallus
 RpainENSMUSG00000018449Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR028155  RPA-interacting protein, central domain
 IPR028156  RPA-interacting protein
 IPR028158  RPA-interacting protein, N-terminal domain
 IPR028159  RPA-interacting protein, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006261 DNA-dependent DNA replication IPI
 biological_processGO:0006281 DNA repair IPI
 biological_processGO:0006310 DNA recombination IPI
 biological_processGO:0006606 protein import into nucleus IDA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016605 PML body IEA
 molecular_functionGO:0044877 protein-containing complex binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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